Discretized Singular Value Decomposition (dSVD) Updated 7 months ago

Koki Tsuyuzaki

Rendered from dcTensor-3.Rmd in dcTensor 1.3.0.
Discretized Simultaneous Non-negative Matrix Factrozation (dsiNMF) Updated 7 months ago

Koki Tsuyuzaki

Rendered from dcTensor-4.Rmd in dcTensor 1.3.0.
Discretized Joint Non-negative Matrix Factrozation (djNMF) Updated 7 months ago

Koki Tsuyuzaki

Rendered from dcTensor-5.Rmd in dcTensor 1.3.0.
Discretized Partial Least Squares (dPLS) Updated 7 months ago

Koki Tsuyuzaki

Rendered from dcTensor-6.Rmd in dcTensor 1.3.0.
Discretized Non-negative Tensor Factorization (dNTF) Updated 7 months ago

Koki Tsuyuzaki

Rendered from dcTensor-7.Rmd in dcTensor 1.3.0.
Discretized Non-negative Tucker Decomposition (dNTD) Updated 7 months ago

Koki Tsuyuzaki

Rendered from dcTensor-8.Rmd in dcTensor 1.3.0.
Discretized Non-negative Tri-Matrix Factorization (dNMTF) Updated 7 months ago

Koki Tsuyuzaki

Rendered from dcTensor-2.Rmd in dcTensor 1.3.0.
Discretized Non-negative Matrix Factorization (dNMF) Updated 1 years ago

Koki Tsuyuzaki

Rendered from dcTensor-1.Rmd in dcTensor 1.3.0.
Cross-validation by mask matrix/tensor (kFoldMaskTensor) Updated 1 years ago

Koki Tsuyuzaki, Itoshi Nikaido

Rendered from nnTensor-4.Rmd in nnTensor 1.3.0.
Independent Component Analysis (ICA) Updated 2 years ago

Koki Tsuyuzaki

Rendered from iTensor-1.Rmd in iTensor 1.0.3.
Multimodal Independent Component Analysis (MICA) and Group Independent Component Analysis (GroupICA) Updated 2 years ago

Koki Tsuyuzaki

Rendered from iTensor-2.Rmd in iTensor 1.0.3.
Multilinear Independent Component Analysis (MultilinearICA) Updated 2 years ago

Koki Tsuyuzaki

Rendered from iTensor-3.Rmd in iTensor 1.0.3.
Vicus: Exploiting local structures to improve network-based analysis of biological dataUpdated 2 years ago

Koki Tsuyuzaki

Rendered from Vicus.Rmd in Vicus 0.99.0.
Guided Partial Least Squares (guided-PLS) Updated 2 years ago

Koki Tsuyuzaki

Rendered from guidedPLS-2.Rmd in guidedPLS 0.99.0.
Partial Least Squares (PLS) Models Updated 2 years ago

Koki Tsuyuzaki

Rendered from guidedPLS-1.Rmd in guidedPLS 0.99.0.
Non-negative Matrix Factorization (NMF and NMTF) Updated 2 years ago

Koki Tsuyuzaki, Itoshi Nikaido

Rendered from nnTensor-1.Rmd in nnTensor 1.3.0.
Simultaneous Non-negative Matrix Factorization (siNMF and jNMF) Updated 2 years ago

Koki Tsuyuzaki, Itoshi Nikaido

Rendered from nnTensor-2.Rmd in nnTensor 1.3.0.
Non-negative Tensor Factorization (NTF and NTD) Updated 2 years ago

Koki Tsuyuzaki, Itoshi Nikaido

Rendered from nnTensor-3.Rmd in nnTensor 1.3.0.
Detection and visualization of cell-cell interactions using LRBase and scTensorUpdated 3 years ago

Koki Tsuyuzaki, Manabu Ishii, Itoshi Nikaido

Rendered from scTensor.Rmd in scTensor 2.17.0.
AnnotationHub-style MeSH ORA Framework from BioC 3.14Updated 3 years ago

Koki Tsuyuzaki, Gota Morota, Manabu Ishii, Takeru Nakazato, Itoshi Nikaido

Rendered from MeSH.Rmd in meshr 2.13.0.
Roadmap to prepare the input matrix for scTensorUpdated 3 years ago

Koki Tsuyuzaki, Manabu Ishii, Itoshi Nikaido

Rendered from scTensor_1_Data_format_ID_Conversion.Rmd in scTensor 2.17.0.
How to reanalyze the results of scTensorUpdated 3 years ago

Koki Tsuyuzaki, Manabu Ishii, Itoshi Nikaido

Rendered from scTensor_4_Reanalysis.Rmd in scTensor 2.17.0.
MeSH.dbUpdated 3 years ago

Koki Tsuyuzaki

Rendered from MeSHDbi.Rnw in MeSHDbi 1.43.0.
LRBaseDbiUpdated 3 years ago

Koki Tsuyuzaki

Rendered from LRBaseDbi.Rnw in LRBaseDbi 2.17.0.
Tensor arithmetic by DelayedTensor Updated 3 years ago

Koki Tsuyuzaki, Itoshi Nikaido

Rendered from DelayedTensor_2.Rmd in DelayedTensor 1.13.0.
Tensor decomposition by DelayedTensor Updated 3 years ago

Koki Tsuyuzaki, Itoshi Nikaido

Rendered from DelayedTensor_3.Rmd in DelayedTensor 1.13.0.
Concept of DelayedTensor Updated 3 years ago

Koki Tsuyuzaki, Itoshi Nikaido

Rendered from DelayedTensor_1.Rmd in DelayedTensor 1.13.0.
Einsum operation by DelayedTensor Updated 3 years ago

Koki Tsuyuzaki, Itoshi Nikaido

Rendered from DelayedTensor_4.Rmd in DelayedTensor 1.13.0.
How to interpret the HTML report generated by cellCellReport functionUpdated 4 years ago

Koki Tsuyuzaki, Manabu Ishii, Itoshi Nikaido

Rendered from scTensor_2_Report_Interpretation.Rmd in scTensor 2.17.0.
How to perform CCI simulation by cellCellSimulate functionUpdated 4 years ago

Koki Tsuyuzaki, Manabu Ishii, Itoshi Nikaido

Rendered from scTensor_3_CCI_Simulation.Rmd in scTensor 2.17.0.
Annotation for unannotated single-cell RNA-Seq data by scTGIFUpdated 4 years ago

Koki Tsuyuzaki, Itoshi Nikaido

Rendered from scTGIF.Rmd in scTGIF 1.21.0.
metaSeqUpdated 11 years ago

Koki Tsuyuzaki

Rendered from metaSeq.Rnw in metaSeq 1.47.0.